Sinking my fork into these vibrant baked spaghetti squash burrito boats feels like a little fiesta on my plate. Picture this: the rich, smoky aroma of taco seasoning wafting through the kitchen as I roast sweet corn and mix tender black beans with juicy Roma tomatoes. Topped with creamy blender salsa and a sprinkle of cotija cheese, each bite transports me straight to the sunny streets of Mexico, without leaving my home!
As summer fades into autumn, there’s no better way to embrace those cozy vibes than with this deliciously satisfying, gluten-free, and vegetarian-friendly dish. Perfect for a quick weeknight dinner or a fun lunch with friends, these twisted burrito boats make healthy eating an absolute delight. The beauty of spaghetti squash is that it provides a light, low-carb alternative while still delivering on flavor and texture. Trust me, this meal is about to become a family favorite! Are you ready to dive into this colorful culinary adventure? Let’s bring some laughter and flavor to your kitchen with the Best Baked Spaghetti Squash Burrito Boats Recipe!
Why Love the Best Baked Spaghetti Squash Burrito Boats Recipe?
Flavor Fusion: Enjoy a delightful mix of vibrant Mexican flavors that take your taste buds on a joyful journey.
Healthy Twist: These boats are not just gluten-free and vegetarian-friendly; they’re low-carb without sacrificing satisfaction.
Easy to Prepare: With straightforward steps and minimal fuss, you’ll have a crowd-pleasing meal ready in no time!
Customizable: Feel free to personalize your burrito boats with different toppings or proteins to suit your cravings.
Perfect for Any Occasion: Whether it’s a cozy dinner at home or a fun gathering with friends, these boats are sure to impress!
Get ready to transform your meal times with this delicious recipe!
Best Baked Spaghetti Squash Burrito Boats Ingredients
For the Squash
• Spaghetti Squash – This low-carb alternative to pasta offers a mild flavor and a wonderful al dente texture when cooked properly.
• Olive Oil – Coating helps achieve a tender texture and prevents sticking while roasting.
• Salt and Pepper – Essential for enhancing the dish’s natural flavors.
For the Filling
• Black Beans – A hearty protein-rich addition that gives texture; can be substituted with pinto or kidney beans if desired.
• Taco Seasoning – Use this flavor enhancer for that distinct Mexican taste; homemade or store-bought works well!
• Corn – Fresh, frozen, or canned – all work perfectly to add a touch of sweetness.
• Roasted Green Chiles – Adds a delightful kick of heat; you can use canned or fresh based on what you have available.
• Roma Tomatoes – Diced for a fresh touch and texture contrast.
For the Toppings
• Cotija Cheese – A crumbled Mexican cheese that contributes a fabulous salty bite; feta can be used as a substitute.
• Lime – A squeeze brings freshness and acidity that enhances all flavors.
• Sour Cream – Provides creaminess; you can swap it for Greek yogurt for a healthier option.
• Pickled Red Onion – This garnish adds a tangy crunch that elevates the dish.
• Blender Salsa – Customizable and perfect for topping; a creamy avocado-based salsa brings all the flavors together.
Dive right into crafting this wonderful Best Baked Spaghetti Squash Burrito Boats Recipe and make every meal a celebration!
How to Make Best Baked Spaghetti Squash Burrito Boats
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Preheat your oven to 400°F. This initial step sets the stage for perfectly roasted spaghetti squash, ensuring a delightful texture.
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Halve the spaghetti squash carefully and scoop out the seeds. Coat the insides with a generous drizzle of olive oil to keep it moist while roasting.
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Poke several holes into the flesh of the squash to allow steam to escape. Place the squash cut-side down on a baking sheet for even cooking.
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Bake for approximately 30 minutes, or until the squash is tender and easily pierced with a fork. You want it to be golden and fragrant!
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Cool the squash slightly before using a fork to gently shred the inside, turning it into noodle-like strands. This is where the magic begins!
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Warm black beans in a pan over medium heat, mixing in taco seasoning until heated through. Set these flavorful beans aside for layering.
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Roast corn and green chiles in a separate pan over high heat until they’re beautifully browned and enhance the dish with a toasty flavor.
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Fill each spaghetti squash half with layers starting with black beans, followed by roasted corn and chiles, and topped with diced tomatoes and crumbly cotija cheese.
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Generously top your creations with creamy blender salsa, a squeeze of lime, dollops of sour cream, and a sprinkle of pickled red onions for that extra zing!
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Serve hot and enjoy the burst of flavors and textures that each delicious bite holds!
Optional: Garnish with fresh cilantro for an added layer of freshness.
Exact quantities are listed in the recipe card below.
Best Baked Spaghetti Squash Burrito Boats Variations & Substitutions
Feel inspired to make this dish your own with these delightful twists and swaps that will elevate your culinary experience!
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Meat Option: Swap black beans for shredded chicken or ground beef for a heartier filling packed with protein.
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Cheese Variations: Try using mozzarella or pepper jack cheese for a different flavor and a gooey, melty texture.
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Spice It Up: Add a pinch of cayenne pepper or diced jalapeños for an extra kick of heat that dances on your palate.
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Herb Boost: Incorporate fresh cilantro or diced green onions into the filling for added freshness and vibrant flavor.
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Vegetable Medley: Mix in other veggies like zucchini or bell peppers to create a colorful, nutrient-rich filling that’s bursting with goodness!
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Sweet Corn Alternative: Swap roasted corn with diced sweet peppers for a juicy sweetness that transforms each bite.
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Creamy Twist: Instead of sour cream, opt for avocado crema made with blended avocado and lime for a rich, creamy topping.
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Gluten-Free Grains: If you prefer more texture, serve your burrito boats over a bed of quinoa or cauliflower rice for a wholesome, multi-dimensional dish.
Embrace these variations and watch your family savor the discovery of new flavors in every bite!
Make Ahead Options
These Best Baked Spaghetti Squash Burrito Boats are perfect for meal prep enthusiasts! You can prepare the spaghetti squash and shred it up to 24 hours in advance, refrigerating it in an airtight container to maintain its delicate texture. Additionally, the filling components like black beans seasoned with taco seasoning and roasted corn can be pre-cooked and stored for up to 3 days. When you’re ready to serve, simply reheat the prepared squash and fillings in the oven to bring them back to life, then assemble the burrito boats with toppings just before serving. This time-saving strategy ensures a delicious meal is only minutes away, making it ideal for busy weeknights!
Expert Tips for the Best Baked Spaghetti Squash Burrito Boats
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Choose the Right Squash: Look for a spaghetti squash that feels heavy for its size with a hard rind to ensure it’s fresh and flavorful.
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Don’t Overcook: Keep an eye on the squash while baking. Overcooking can lead to mushy “noodles.” Aim for fork-tender, as it cooks a little more after being taken out.
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Layer Strategically: Start with black beans on the bottom to prevent other ingredients from becoming soggy. This helps maintain the delightful texture of your burrito boats.
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Enhance Your Salsa: Customize your creamy blender salsa with extra garlic or lime zest to amplify the flavors. A rich salsa makes the Best Baked Spaghetti Squash Burrito Boats even more delightful!
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Don’t Skip the Toppings: Toppings like cotija cheese, lime, and pickled red onion add essential flavors and textures, creating a deliciously vibrant dish that truly stands out.
How to Store and Freeze Best Baked Spaghetti Squash Burrito Boats
Fridge: Place any leftovers in an airtight container and store in the refrigerator for up to 3 days. Reheat in the oven to maintain texture.
Freezer: For longer storage, freeze the unbaked stuffed spaghetti squash halves tightly wrapped in plastic wrap or in a freezer-safe container. They can last up to 3 months.
Reheating: To reheat, bake from frozen at 375°F for 45-60 minutes, or thaw in the fridge overnight and then bake until heated through.
Airtight Guidance: Always ensure your storage containers are airtight to prevent freezer burn and keep your delicious Best Baked Spaghetti Squash Burrito Boats fresh and flavorful!
What to Serve with Best Baked Spaghetti Squash Burrito Boats?
Embrace a delightful array of flavors and textures to complement your next meal.
- Simple Green Salad: A refreshing mix of greens with a citrus vinaigrette brightens each bite and balances the bold burrito boats.
- Tortilla Chips with Salsa: Crunchy and salty chips paired with homemade salsa make for an irresistible appetizer that sets the tone for the meal.
- Mexican Street Corn: Charred corn on the cob, slathered in lime and cotija cheese, echoes the flavors of the burrito boats for a cohesive experience.
- Guacamole: Creamy and rich, guacamole brings a smooth element that harmonizes beautifully with the crunchy toppings in the boats.
- Avocado Toast: Lightly seasoned avocado spread on crusty bread offers a satisfying side that enhances the fresh flavors of the main dish.
- Pico de Gallo: This zesty tomato salsa with onions and cilantro adds a fresh kick, enhancing the brightness and freshness of your meal.
- Chili Lime Fruit Salad: A mix of seasonal fruits sprinkled with chili powder and lime juice offers a sweet, spicy contrast to the savory seasonings of the burrito boats.
- Sparkling Water with Lime: A refreshing drink option that cleanses the palate between bites and complements the vibrant flavors of the meal.
- Chocolate Avocado Mousse: End your feast on a sweet note with this creamy dessert that brings rich flavors while keeping the meal light and satisfying.
- Coconut Rice: Fluffy rice made with coconut milk adds a touch of sweetness, perfect for soaking up the tasty toppings of the burrito boats.
Best Baked Spaghetti Squash Burrito Boats Recipe FAQs
How do I know when my spaghetti squash is ripe?
Absolutely! When selecting a spaghetti squash, look for one that feels heavy for its size with a hard rind. It should have a uniform color and no dark spots. A ripe squash also sounds hollow when tapped.
What’s the best way to store leftovers?
Very! Place any leftovers in an airtight container and keep them in the refrigerator for up to 3 days. When ready to enjoy again, reheat in the oven at 350°F until warmed through to maintain texture and flavor.
Can I freeze the baked spaghetti squash burrito boats?
Absolutely! For longer storage, you can freeze the unbaked stuffed spaghetti squash halves. Wrap them tightly in plastic wrap or place them in a freezer-safe container, and they should stay good for up to 3 months. To reheat, bake from frozen at 375°F for approximately 45-60 minutes, or thaw overnight in the fridge before baking until heated through.
What if my spaghetti squash turns out mushy?
Don’t worry! If you find your squash has turned mushy, it may have been overcooked. To avoid this, aim for fork-tender, keeping an eye on it while baking and gently release steam by poking holes. Remember, it continues cooking slightly after being removed from the oven.
Are these burrito boats suitable for vegans or those with dietary restrictions?
Yes, indeed! The Best Baked Spaghetti Squash Burrito Boats Recipe is gluten-free and vegetarian-friendly. For a vegan twist, simply omit the cotija cheese and sour cream or replace them with vegan alternatives, such as cashew cream or nutritional yeast for a cheesy flavor.
How do I enhance the flavor of the black beans?
Absolutely! For more flavor, try sautéing minced garlic and diced onions in a pan before adding your black beans along with taco seasoning. This step not only enriches the taste but also adds depth to your burrito boats, making them even more delightful!

Best Baked Spaghetti Squash Burrito Boats Recipe You’ll Love
Ingredients
Equipment
Method
- Preheat your oven to 400°F.
- Halve the spaghetti squash and scoop out the seeds. Coat the insides with olive oil.
- Poke several holes in the flesh of the squash. Place it cut-side down on a baking sheet.
- Bake for approximately 30 minutes, or until the squash is tender.
- Cool the squash slightly, then shred the inside with a fork.
- Warm black beans in a pan over medium heat with taco seasoning.
- Roast corn and green chiles in another pan until browned.
- Fill each spaghetti squash half with black beans, corn, chiles, tomatoes, and cotija cheese.
- Top with blender salsa, lime, sour cream, and pickled red onions.
- Serve hot and enjoy!







